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dc.title | Study of absorption and emission spectra of substituted terthiophene compounds by methods of theoretical chemistry | en |
dc.contributor.author | Kužela, Tomáš | |
dc.contributor.author | Bondarev, Dmitrij | |
dc.contributor.author | Kutálková, Eva | |
dc.contributor.author | Benková, Zuzana | |
dc.contributor.author | Hrnčiřík, Josef | |
dc.contributor.author | Ingr, Marek | |
dc.relation.ispartof | Journal of Computational Chemistry | |
dc.identifier.issn | 0192-8651 Scopus Sources, Sherpa/RoMEO, JCR | |
dc.identifier.issn | 1096-987X Scopus Sources, Sherpa/RoMEO, JCR | |
dc.date.issued | 2024 | |
dc.type | article | |
dc.language.iso | en | |
dc.publisher | Wiley | |
dc.identifier.doi | 10.1002/jcc.27336 | |
dc.relation.uri | https://onlinelibrary.wiley.com/doi/10.1002/jcc.27336 | |
dc.relation.uri | https://onlinelibrary.wiley.com/doi/epdf/10.1002/jcc.27336 | |
dc.subject | density functional theory | en |
dc.subject | molecular dynamics | en |
dc.subject | self-assembly | en |
dc.subject | terthiophene | en |
dc.subject | UV/vis spectrum | en |
dc.description.abstract | Terthiophene derivatives attract interest due to their prospective applications in optoelectronic or sensor devices. Due to their nontoxicity they can be considered as suitable candidates in biological applications. Supramolecular organization of the matter is one of the most interesting topics in contemporary materials science. Amphiphilic chromophores based on substituted terthiophenes are capable of self-assembly into supramolecular architectures. In this work, we aim at simulation of the spectral properties of terthiophene with oligo(ethylene oxide) substituents by the methods of quantum chemistry and molecular dynamics (MD). The potential energy surface (PES) of this molecule was determined by the methods of density functional theory (DFT) for the ground state and time-dependent density-functional theory (TD-DFT) for the excited state. MD simulations in water than revealed the most frequented molecular conformations in both these states. Absorption and fluorescence spectra were determined for all these conformations, including the surrounding water molecules, using TD-DFT and averaged over the conformation space to obtain the final absorption and fluorescence spectrum. The calculated spectra were compared with their experimental counterparts and the differences were discussed in context of the supramolecular structure revealed by confocal microscopy. In spite of its simplicity, this approach provides a satisfactory approximation of absorption and fluorescent spectra of these molecules obtained by computational methods. | en |
utb.faculty | Faculty of Technology | |
dc.identifier.uri | http://hdl.handle.net/10563/1011961 | |
utb.identifier.scopus | 2-s2.0-85186910326 | |
utb.identifier.wok | 001177286000001 | |
utb.identifier.pubmed | 38436207 | |
utb.identifier.coden | JCCHD | |
utb.source | j-scopus | |
dc.date.accessioned | 2024-04-17T13:13:04Z | |
dc.date.available | 2024-04-17T13:13:04Z | |
dc.description.sponsorship | Tomas Bata University in Zlín, TBU, (IGA/FT/2023/006); Ministerstvo Školství, Mládeže a Tělovýchovy, MŠMT | |
dc.description.sponsorship | Tomas Bata University in Zlin | |
utb.ou | Department of Physics and Materials Engineering | |
utb.contributor.internalauthor | Kužela, Tomáš | |
utb.contributor.internalauthor | Kutálková, Eva | |
utb.contributor.internalauthor | Hrnčiřík, Josef | |
utb.contributor.internalauthor | Ingr, Marek | |
utb.fulltext.affiliation | Tomáš Kužela a, Dmitrij Bondarev b, Eva Kutálková a, Zuzana Benková b, Josef Hrnčiřík a , Marek Ingr a a Faculty of Technology, Department of Physics and Materials Engineering, Tomas Bata University in Zlín, Zlín, Czech Republic b Polymer Institute, Slovak Academy of Sciences, Bratislava, Slovakia | |
utb.fulltext.dates | Issue Online: 29 April 2024 Version of Record online: 04 March 2024 Manuscript accepted: 19 February 2024 Manuscript revised: 16 January 2024 Manuscript received: 30 September 2023 | |
utb.fulltext.sponsorship | This work was supported by the Tomas Bata University in Zlín project [grant no. IGA/FT/2023/006]. | |
utb.fulltext.sponsorship | We thank Dr. Pavel Šácha for his kind help with LSCM experiments. Computational resources were provided by the e‐INFRA CZ project (ID:90254), supported by the Ministry of Education, Youth and Sports of the Czech Republic. | |
utb.wos.affiliation | [Kuzela, Tomas; Kutalkova, Eva; Hrncirik, Josef; Ingr, Marek] Tomas Bata Univ Zlin, Fac Technol, Dept Phys & Mat Engn, Zlin, Czech Republic; [Bondarev, Dmitrij; Benkova, Zuzana] Slovak Acad Sci, Polymer Inst, Bratislava, Slovakia; [Kuzela, Tomas] Tomas Bata Univ Zlin, Fac Technol, Dept Phys & Mat Engn, Nam TG Masaryka 275, Zlin 76001, Czech Republic | |
utb.scopus.affiliation | Faculty of Technology, Department of Physics and Materials Engineering, Tomas Bata University in Zlín, Zlín, Czech Republic; Polymer Institute, Slovak Academy of Sciences, Bratislava, Slovakia | |
utb.fulltext.projects | IGA/FT/2023/006 | |
utb.fulltext.projects | 90254 | |
utb.fulltext.faculty | Faculty of Technology | |
utb.fulltext.ou | Department of Physics and Materials Engineering |